| Prefecture | city/town | Name | Category |
| Hokkaido | Sapporo | INO'S PLACE | Backpackers' Hostel |
| Sapporo | TIME PEACE APARTMENT | Guest house | |
| Sapporo | Jimmyz Backpackers | Backpackers' Hostel | |
| Otaru | Mori No Ki | Backpackers' Hostel | |
| Hakodateyama | Hakodateyama Guest house | Guest house | |
| Aomori | Towadako | Country Road | B&B |
| Iwate | Morioka | Kumagai Ryokan | Ryokan |
| Fukushima | Fukushima | Youth Guest House Atoma | Youth Guesthouse |
| Miyagi | Sendai | Miyagi Guest House | Guest house |
| Tochigi | Nikko | Nikko Park Lodge | B&B |
| Nikko | Rindou-no-ie | Minsyuku | Chiba | Narita | Azure Guesthouse | Backpackers' Hostel |
| Narita | Narita Airport Hostel | Hostel | |
| Narita | Backpackers Fuji | Backpackers' Hostel | |
| Kamogawa | Anuenue Backpackers | Backpackers' Hostel | |
| Tokyo | Asakusa | Sakura Hostel | Backpackers' Hostel |
| Jinbo-cho | Sakura Hotel | Budget hotel | |
| Ikebukuro | Sakura Hotel Ikebukuro | Budget hotel | |
| Hatagaya | Sakura Hotel Hatagaya | Budget hotel | |
| Kuramae | K's House Tokyo | Backpackers' Hostel | |
| Asakusa | Khaosan Tokyo Guesthouse | Backpackers' Hostel | |
| Asakusa | Khaosan Tokyo Asakusa Annex | Backpackers' Hostel | |
| Asakusa | Taito Ryokan | Budget Ryokan | |
| Asakusa | Tokyo Ryokan | Budget Ryokan | |
| Asakusabashi | Ann Hostel Asakusabashi | Budget Ryokan | |
| Minami-Senju | Hotel New Azuma | Inexpensive Hotel | |
| Minami-Senju | Backpacker's Hotel New Koyo | Inexpensive Hotel | |
| Minowa | Andon Ryokan | Budget Ryokan | |
| Minami-Senju | Tokyo Backpackers | Backpackers' Hostel | |
| Minami-Senju | Juyoh Hotel | Inexpensive Hotel | |
| Ueno | Sawanoya Ryokan | Budget Ryokan | |
| Ueno | OAK HOTEL | Hotel | |
| Ikebukuro | Kimi Ryokan | Budget Ryokan | |
| Korakuen | Homeikan | Ryokan | |
| Yamanashi | Kawaguchi-ko | Kawaguchiko Inn | Business hotel |
| Kanagawa | Yokohama | Yokohama Hostel Village | Inexpensive Hotels |
| Hakone | B&B Pansion Hakone | Bed and Breakfast | |
| Ishikawa | Kanazawa | Kikunoya Ryokan | Ryokan |
| Kanazawa | Guest House Pongyi | Guest house | |
| Kanazawa | guesthouse namaste | Guest house | |
| Nagano | Hakuba | Hakuba Alps Backpackers | Backpackers' Hostel |
| Hakuba | K's House Hakuba Alps | Backpackers' Hostel | |
| Omachi | Shizuka no Sato | Minshuku | |
| Matsumoto | Kazeno Yasu yado | Guese house | |
| Matsumoto | Ryokan Seifuso | Ryokan | |
| Yudanaka | Shimaya | Ryokan | |
| Magome | Guest house Magomechaya | Guest house | |
| Aichi | Nagoya | Otohaya-bessou | Guest house |
| Nagoya | Nagoya Rolen Hotel | Hotel | |
| Nagoya | Hosteｌ Ann | Backpackers' Hostel | |
| Gifu | Takayama | J-Hoppers Hida Takayama | Backpackers' Hostel |
| Takayama | Hida Takayama Tenshoji YH | Youth Hostel | |
| Shiga | Otsu | BSC Water Sports Center | Backpackers' Hostel |
| Kyoto | Kyoto Sta. area | J-Hoppers Kyoto | Backpackers' Hostel |
| Kyoto Sta. area | Kyoto Hana Hostel | Backpackers' Hostel | |
| Kyoto Sta. area | Ks' House Kyoto | Backpackers' Hostel | |
| Kyoto Sta. area | Kyoto Tomato Hostel | Backpackers' Hostel | |
| Higashiyama | Gojo Guesthouse Annex | Backpackers' Hostel | |
| Ginkakuji | Roku Roku | Backpackers' Hostel | |
| Kyoto Sta. area | Tour Club | Backpackers' Hostel | |
| Kyoto Sta. area | Budget Inn | Backpackers' Hostel | |
| Nishijin | Cheapest Inn | Backpackers' Hostel | |
| Gion | Acorn House | Backpackers' Hostel | |
| Utano | Utano YH | Youth Hostel | |
| Higashiyama | Higashiyama YH | Youth Hostel | |
| Higashiyama | Tomato Guesthouse | Backpackers' Hostel | |
| Higashiyama | Hanakiya Inn | Budget Ryokan | |
| Demachiyanagi | Guesthouse TONBO | Backpackers' Hostel | |
| Kyoto Sta. area | Tarocafe Inn | Backpackers' Hostel | |
| Higashiyama | Waraku An | Backpackers' Hostel | |
| Gion | Guest house RAKUZA | Guesthouse | |
| Ukyo | BOLA-BOLA | Backpackers' Hostel | |
| Kyoto Sta. area | IKOI-NO-IE | Backpackers' Hostel | |
| Kyoto Sta. area | Nagomi-Ryokan Yuu | Budget Ryokan | |
| Kyoto Sta. area | O-yado Sato | Guesthouse | |
| Gion | Ichiensou | Backpackers' Hostel | |
| Kamigyo-ku | NAGOMI | Backpackers' Hostel | |
| Osaka | Umeda | J-Hoppers Osaka Central | Backpackers' Hostel |
| Tamatsukuri | U-en | Guesthouse | |
| Namba | Guesehouse KOMA | Guesthouse | |
| Nishinari | Rizan Minami-kan | Inexpensive Hotel | |
| Nishinari | Raizan Kita-kan | Inexpensive Hotel | |
| Nishinari | Business Hotel Mikado | Inexpensive Hotel | |
| Nishinari | Hotel Chuo | Inexpensive Hotel | |
| Nishinari | Hotel Chuo Oasis | Inexpensive Hotel | |
| Nishinari | Hotel Chuo Selene | Inexpensive Hotel | |
| Nishinari | Hotel Taiyo | Inexpensive Hotel | |
| Nishinari | Hotel Toyo | Inexpensive Hotel | |
| Shin osaka | Shinosaka YH | Youth Hostel | |
| Nara | Nara | Nara Youth Hostel | Youth Hostel |
| Nara | Seikan-so | Budget Ryokan | |
| Nara | GUESTHOUSE MAKURA | Guest house | |
| Nara | Nara Ugaya Guest house | Guest house | |
| Nara | Nataka B&B | B&B | |
| Oji | Yogendo | Backpackers' Hostel | |
| Hyogo | Kobe | Kobe Dears Backpackers House | Backpackers' Hostel |
| Wakayama | Koyasan | List of Shukubo | Temple lodging |
| Koyasan | Koyasan Youth Hostel | Youth Hostel | |
| Tanabe | Buddha Guest House | Backpackers' Hostel | |
| Okayama | Kurashiki | Hotel Young Inn Kurashiki | Business hotel |
| Hiroshima | Hiroshima | J-Hoppers Hiroshima Trad | Backpackers' Hostel |
| Hiroshima | Hana Hostel | Backpackers' Hostel | |
| Hiroshima | World Friendship Center | Bed and Breakfast | |
| Hiroshima | Hotel 28 | Inexpensive Hotel | |
| Iwakuni | Iwakuni Youth Hostel | Youth Hostel | |
| Ehime | Matsuyama | Matsuyama Youth hostel | Youth hostel |
| Matsuyama | Fujiya Guest House | Guesthouse | |
| Imabari | Komecho Ryokan | Ryokan | |
| Kochi | Aki | Minsyuku Ikumi | Minsyuku |
| Tokushima | Miyoshi | Ku-Nel-Asob | Guesthouse |
| Fukuoka | Hakata | Khaosan Fukuoka | Backpackers' Hostel |
| Hakata | Hakata Riverside Hostel | Hostel | |
| Hakata | Guest house Kaine | Guest house | |
| Dazaifu | Masuya Dong | Backpackers' Hostel | |
| Nagasaki | Nagasaki | Fujiwara Ryokan | Inexpensive ryokan |
| Nagasaki | Nagasaki Int'l Hostel Akari | Backpackers' Hostel | |
| Oita | Beppu | Beppu Guesthouse | Backpackers' Hostel |
| Kumamoto | Kumamoto | Guesthouse Kumamoto | Guest house |
| Aso | Aso Base Backpackers | Backpackers's Hostel |
